Week #4

Done

• Accomplish the programing assignments of Course 1: Neural Networks and Deep Learning of deeplearning.ai in Coursera.
• Accomplish both the tutorial and the programing assignments of Course 2: Improving Deep Neural Networks: Hyperparameter tuning, Regularization and Optimization of deeplearning.ai in Coursera.
• Try FreeSurfer:
  • Perform a full recon-all on the nifti file, it takes 7 hours for a full recon-all. Here is the result.
  • Perform a full recon-all on a pre-existing subject folder, it takes 6.6 hours for ful recon-all on a pre-existing subject folder. Here is the result

Issues encounted

• To visualize the result, I need to open a freeview GUI

  • There is an error with freeview -v

    error: Server is already active for display 0 If this server is no longer running, remove /tmp/.X0-lock and start again.

    • try: ps auxw |grep X

    ` root 2863 0.0 0.0 467416 123248 tty7 Ssl+ Oct15 0:40 /usr/lib/xorg/Xorg -core :0 -seat seat0 -auth /var/run/lightdm/root/:0 -nolisten tcp vt7 -novtswitch`

To do

• FreeSurfer tutorial, be familor with the software. Link